Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825599.1_cds_XP_016502381.1_16031
CDS Infomation

[gene=LOC107820586] [db_xref=GeneID:107820586] [protein=ankyrin repeat-containing protein At5g02620-like] [protein_id=XP_016502381.1] [location=complement(join(93011..93889,94469..94878,94968..95286))] [gbkey=CDS]
Sequence

ATGGAGGCATCTATGCCCTCGAAAACGATGAAGAAACAGTTAACGGGGAAACGTGAGGAC
ACTGTCTTGCATTCATTGGCTAGAGCAGGAAATCTTGTTGAAATAAGAGAGATTATCGAT
AAAACGGGAAAGGAAGAATTGGAAGAGCTGTTGATAAAGCAAAATTCAGCTGGAGAGACC
CCTTTGTATGTTTCAGCAGAATATGGTTATTATGAGTTAGTTAAGGAGATGATCAAGTAC
TATGATCTTGTTTCTGCTGGAATCAAAGCAAGGAACGGATTTGATGCGCTGCACATTGCT
GCTAAACAAGGGGATTTGGATGTGGTGAAGGTACTAATGGGAGCACATCCTGAGCTGTCA
ATGACTGTCGATAATGCAAATACAACAGCTTTGCATAGTGCAGCAAACCAAGGGCATATT
GAGGTGGTGAATTATCTATTAGAAGCAGAGAAAAGTTTGGCCACTATTGCTAAAAGTAAT
GGGAAAACAGCACTTCATTCTGCTGCCAGAAATGGACATGTGCAGGTTGTGAAGGCCCTT
TTGAATAAGGAGCGGGGAATTGCGAGCCGGATGGATAAGAAGGGGCAGACTGCTCTTCAC
ATGGCTGTCAAAGGACAAAATCTTGAGGTTGTAGAGGAGCTGATTAGAGCAGATGCTAAG
TCGATAAATATGGTCGACACAAAGGGCAATACAGCATTGCATATTGCAGCCCGGAAAGGA
AGGGCTCAGATTGTTAAGTTGCTGCTTGGGCAGAAAGAGACGGACACTAAAGCTGTAAAT
AGGTCCAACGAAACAGCCATTGACACTGCAGAGAAAATGGGACAGGTCAATATTGCAGTC
ATCCTACAAGAATCAGGTGTACAAAGTATCCGAGCCATCAAACCTCAGGCAACAAATCCA
GCAAGAGAGTTGAAGCAAACTGTTAGTGACATAAAACATGAAGTGCACTATCAAATGGAA
CATACACGACGGACAAGAAAACGTATACATGGCATTGCCAAACGCATAGATAAAATGCAT
GCTGAAGGCCTTAACAATGCTATTAATTCCACCACAGTTGTAGCTGTACTCATTGCCACA
GTCGCCTATGCAGCGATTTTTTCTGTCCCGGGACAATACATAGAGTATGCAGAAGACATC
CCACCAGGCCATTCCCTTGGAGAAGCAAATATAGCACCAAGCCCCTTATTTCTTATATTC
TTTGTCCTCGACTCTATCGCCTTATTCATCTCTCTTGCAGTTGTGATTGTTCAGACATCA
ATCGTGGTGATCGAAAGCAAAGCAAAGAAGCAGATGATGGCTATCATAAACAAGCTTATG
TGGTTGGCATGTGTGCTTATTTCAGTGGCTTTTTTGGCTCTATCGTTTGTTGTGGTAGGC
AAGAATGAGAAGTGGCTGGCTGTTGTAGTCACTATAATAGGAACAATCATATTAGTTGCA
ACACTAGGTACACTGTGTTATTGGGTCATAATGCATCGGATAGAATCCTCAAACAAGAGG
AACATCCGAAAGAACTCTCTGGCCAGCAGGTCCTTGTCCTGGTCAGCCTCAGTCATCTCT
GATTCAGATGTTCTAAACAATGAATACAAGAAAATGTATGCTATCTAG

Peptide Sequence

PEP ID

XP_016502381.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tabacum]
Sequence

MEASMPSKTMKKQLTGKREDTVLHSLARAGNLVEIREIIDKTGKEELEELLIKQNSAGET
PLYVSAEYGYYELVKEMIKYYDLVSAGIKARNGFDALHIAAKQGDLDVVKVLMGAHPELS
MTVDNANTTALHSAANQGHIEVVNYLLEAEKSLATIAKSNGKTALHSAARNGHVQVVKAL
LNKERGIASRMDKKGQTALHMAVKGQNLEVVEELIRADAKSINMVDTKGNTALHIAARKG
RAQIVKLLLGQKETDTKAVNRSNETAIDTAEKMGQVNIAVILQESGVQSIRAIKPQATNP
ARELKQTVSDIKHEVHYQMEHTRRTRKRIHGIAKRIDKMHAEGLNNAINSTTVVAVLIAT
VAYAAIFSVPGQYIEYAEDIPPGHSLGEANIAPSPLFLIFFVLDSIALFISLAVVIVQTS
IVVIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKNEKWLAVVVTIIGTIILVA
TLGTLCYWVIMHRIESSNKRNIRKNSLASRSLSWSASVISDSDVLNNEYKKMYAI

Transcript Sequence

Gene sequence data has not been registered.